Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIIAHSNEIAHPIFKSADKLFTLYQGDCNEVLPQ-FENAFDLIFADPPYFLSNDGLSIQSGKIVSVNKGDWDKENGINDIDEFNYQWINNAKKALKNTGSLLISGTYHNLF-----------SLGRILQKLDFKILNLITWQKTNPPPNF------SCRYLTHSAEQIIWARKSYKHKHVFNYEILK-KINNNKQMRDVWNFPAIAP--------WEKANGKHPTQKPLALLVRLLLMASDDNSLIGDPFSGSSTTGIAANLLKREFIGIEKESRFIKISMNRKLELDARHQEIRSKIKDLNFQ |
1BOO Chain:A ((11-298)) | ----------------TTSNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYG--------------N-LEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYMKGVPARSIYNFRVLIRMIDEVGFFLAEDFYWFNPSKLPSPIEWVNKRKIRVKDAVNTVWWFSKTEWP--KSDITKVLA-----SIPPNLLQISNSESNGQYLANCKLMGIKAHPARFPAKLPEFFIRMLTEPDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYVAASAFRFLDNNISEEKITDIYNRILNG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BOO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45482 for 1688 contacts (-26.9/contact) +
2D Compatibility (PS) -23370 + (NN) -8919 + (LL) 2024
1D Compatibility (HY) -7200 + (ID) 2100
Total energy: -85047.0 ( -50.38 by residue)
QMean score : 0.285
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