Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKRIKVGSDLNKKESLLDAFVKTYLQTLE------PISSKRLKELANLKVSCATIRNYFQILSKEGMLHQAHSSGARLPTFKAFENYWHKSLRFEVLKVNEKRLKSASENFGLFTLLKKPSLERLERVIECEKRFLILDFLAFSCAVGYSVKMEKFLLELVGRSVKEVRLIAASVNALSLARQLERLEYSSAQITRFNLMGLKTLLNSPLFFDILEGKVLERFKKGLHFIEPDCMLVTRPIEFQNERMQLLCVGKLECDYEGFFQTISKEE |
2JT1 Chain:A ((3-71)) | ----------ESIVTKIISIV-----QERQNMDDGAPVKTRDIADA--AGLSIYQVRLYLEQLHDVGVLEKVNAGKGVPGLWRLLE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JT1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31908 for 418 contacts (-76.3/contact) +
2D Compatibility (PS) -6620 + (NN) 306 + (LL) 17824
1D Compatibility (HY) -3600 + (ID) 450
Total energy: -24448.0 ( -58.49 by residue)
QMean score : 0.466
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