Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASFSILSIFKIGVGPSSSHTIGPMEAGARFCGLLKGILEQVERVQITLHGSLALTGKGHLSDEAVLIGLHGIYANELDITTKKALLHEAFENKVLKLANQHHIPFDYAKDLIFDNKPLARHQNALILKAFNAKNEVLKEETYYSVGGGFVYTEKELDNLSEEGENESVAYDFSSAKELLELCQKHQKSIAEIVRLRENALKNHPDATMTKIYHAMLECYHNGANSKERYLPGSLKVTRLAPSVKTRLEKHPTSGKDPLALIDYISLYARSIAEENASGGKVVTAPTNGACAVVPSVLSYAKNHLFENLSQKSINDFLLTSAAIGYLYKKNASLSGAEAGCQAEIGVASSMAAGGLAHLCQATTQQVLIASEIAMEHHLGLTCDPVGGLVQIPCIERNVLGAIKAISASKLALEDEYKPKVSLDEVIATMYATGKDMNEKYKETSLGGLAKTLKC |
| 3VID Chain:A ((306-341)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VID.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2941 for 146 contacts (-20.1/contact) +
2D Compatibility (PS) -3673 + (NN) -673 + (LL) 28012
1D Compatibility (HY) -2400 + (ID) 550
Total energy: 17775.0 ( 121.75 by residue)
QMean score : 0.234
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