Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKELILKRIKEARAKHAIQGANPIYRNIIKVEFEDLVEEYKHFQVLNKAELIESAKENLEQAILKALENFQSKKVLHSTDLNLNFEAFKDFTLQPYDKEIEAMREELFEIDTALLHGVCGISSLGMIGAVSSHASPRLLSLITLNCIILLKKES--IVRNLSEG----VQALKNQGQNGALPTNMLLIGGPSRTADIELKTVFGVHGPQKVAVILY |
4BPL Chain:A ((251-314)) | ----------------------------------------------------------------------------------------------------------------------------------IDHQALPCLLSLLTQNLKKSIKKEACWTISNITAGNKDQIQAVINAGIIGPL-VNLL------QTAEFDIKKEAAWAISNATSGGSH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BPL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12050 for 331 contacts (-36.4/contact) +
2D Compatibility (PS) -6205 + (NN) -2972 + (LL) 11244
1D Compatibility (HY) -4400 + (ID) 1200
Total energy: -15583.0 ( -47.08 by residue)
QMean score : 0.350
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