Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEFYQVYDPLGHIWLSALVALSPIALFFISLIVFKLKGYSAGFLSLALSILIALFVYKMPVQMVSASFFYGFLYGLWPIAWIVIAAIFLYNLSVKSGYFEILKESILSLTPDHRILVILIGFCFGSFLEGAIGFGGPVAITAAILVGLGLNPLYAAGLCLIANTAPVAFGAVGIPITAMASVVGIPELEISQMVGRVLPIFSIGIPFFIVFLMDGFRGIRETFPAVAVTGFSFAIAQFLSSNYLGPQLPDIISALVSLVATTLFLKFWQPKHIFTSNGKEPTISTEKHHICKVVVAWMPFVLLTITIIIWTQPWFKALFKEGGALAFSNFAFEFNSISQKIFKTVPIVTEATNFPVVFKLPLILTTGTSIFLAALLSVFLLRVKISDAIGVFGATLKEMRLPILTIGVVLAFAYVANYSGMSATLALALADTGHVFTFLSPMVGWLGVFLTGSDTSSNLLFGSLQMLIATQLGLPEVLFLAANTSGGVVGKMISPQSIAIACAAVGLVGKESELFRFTV-KYSIALAIIMGIVFTLIAYVFPFIIPVTPT |
4CI2 Chain:B ((71-451)) | MINFDTSLPTSHMYLGS------------DMEEFHGRTLHDDDSCQVIPVLPHVMVMLIPGQTLPLQLFH-------------------------PQEVSMVRNLI----QKDRTFAVLA---YSNVREREAHFGTTAEIYAYREEQE-----YGIETVKVKAIGRQRFKVLEIRTQSD----GIQQAKVQILPERVLPS-TMSAVQLQSLSRRHIRAFRQWWQKYQKRKFHCASLT---------SWPPWLYSLYD--AETLMERVKRQLHEWDENLKDESLPTNPIDFSYRVAACLPI----------DDALRIQLLKIG-------------SAIQRLRCELDIMNKCTSLCCKQCQDTEITTKNEIFSLSLCGP--------------------------------MAAYVNPHGYIHETLTVYKA---------------CNLNLSGRPSTEHSWFPGYAWTIAQC-----------RICGNHMG------------------------WKFTATKKDMSPQKFWGLTRSA----------LLPR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CI2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -391286 for 2933 contacts (-133.4/contact) +
2D Compatibility (PS) -37589 + (NN) 6742 + (LL) 16192
1D Compatibility (HY) -11600 + (ID) 3650
Total energy: -421191.0 ( -143.60 by residue)
QMean score : 0.225
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