Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGRAFEYRRAAKEKRWDKMSKVFPKLAKAITLAAKEGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRASSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNRKSVFECLKSEVENLKLSLEDLEFALIDYGLEELEEVGDKIIIRGDYNSFKLLNEGFESLRLPIIKAGLQRIATTP-IELNDEQMELTEKLLD-RIEDDDDVVALYTNIE |
| 2DJW Chain:A ((6-72)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLIRPRGNRVQALGEAIAELPQVAEVYSVTG-PYDLVALVRLKDVEELDDVVTQGILSLEGVERTETLLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DJW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -17767 for 443 contacts (-40.1/contact) +
2D Compatibility (PS) -6486 + (NN) -1383 + (LL) 11992
1D Compatibility (HY) -1600 + (ID) 500
Total energy: -15744.0 ( -35.54 by residue)
QMean score : 0.336
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