Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRFSIFFKVVALFMITLFSFGAFAYYFVSSQISHENYQNEMRHYQFVTTINEILNNYSDYRAIEDYLYKIGFRETTIENLEKVLAKRRHQLHHRNIWYAEVFKFSDMVFILLKKDEHFVLYKDLHSVSYRNYFLAITVGLLLILFLFLFVLQSLLPLRELRSQVKRFAQGDKSVSCKSKQKDEIGDLANEFDNCIQKINAMNESRVLFLRSIMHELRTPITKGKILSSMLKEE-LSCKRFSSIFDHLNMLIEQFARIEQLAS------KNYGSNKEKFLMS-------DLIDKIEKMLLIDEDKKSPIHVSSSNYIIEADFELFAIALKNMIDNAIKYSDDK---QVFLDFIGNNLVVSNKSKPL---KEDFEKYLQPYFKSSNPSQAHGFGLGMYIIKNALEAMGLNLSYHYSNG--RICFTIHDCVFNSFYDLEADNEELPPPRKFERGEGNEGNRKSQLWG |
| 3D36 Chain:A ((20-221)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SISHEIRNPLTAARGFIQLIEEQPLAADKRR---QYARIAIEELDRAEAIITDYLTFAKPAPETPEKLNVKLEIERVIDILRPLANMSCVD------IQATLAPFSVIGEREKFRQCLLNVMKNAIEAMPNGGTLQVYVSIDNGRVLIRIADTGVGMTKEQLERLGEPYFTTKG---VKGTGLGMMVVYRIIESM---------NGTIRIESEIHKGTTVSIYLPLAS-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D36.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65160 for 1147 contacts (-56.8/contact) +
2D Compatibility (PS) -19340 + (NN) -6817 + (LL) 20004
1D Compatibility (HY) -10400 + (ID) 2500
Total energy: -84213.0 ( -73.42 by residue)
QMean score : 0.292
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