Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MTEMELKLIKIDTSHYFEKKPGLGERMDYAGRCYYNKFQRVNAMLTSSLIQKHLKREI------------EIAHNLILRNDKVENIVFDYNGRNPERFYHKAQLLLREEGFMNFTAYNTKTPGHLHLYVHKGHTELGEGERLIKTLSMKLAQGLP------------KEWRVFPSNEWPK-------EFNILALPYEVFAKERGSSWAKHL---------------------------------------------------- |
| 1FVI Chain:A ((1-292)) | AITKPLLAATLENIEDVQFPCLATPKIA-GIRSVKQTQMLSRTFKPIRNSVMNRLLTELLPEGSDGEISIEGATFQDTTSAVMTGHAKFSYYWFDYVTDDPLKKYIDRVEDMKNYITVHPHILEHAQ----VKIIPLIPVEINNITELLQYERDVLSKGFEGVMIRKPDGKYKFGRSTLKEGILLKMKQFKDAEATIISMTALFKSGKVEEDVMGSIEVDYDGVVFSIGTGFDADQRRDFWQNKESYIGKMVKFKYFEMPRFPVFIGIR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FVI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2478 for 1031 contacts (-2.4/contact) +
2D Compatibility (PS) -18337 + (NN) -3184 + (LL) 84
1D Compatibility (HY) -5600 + (ID) 950
Total energy: -30465.0 ( -29.55 by residue)
QMean score : 0.278
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