Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIWLLVWGLYSLAFLHAIETIEKAPTNVEDRDKAPHLLLLAGIQGDEPGGFNATNLFLMHY--SVLKGLVEVVPVLNKPSMLRNHRGL---YGDMNRKFAALDKNDPEYPTIQEIKSLIAKPSVDAVLHLHDGGGYYR-PVYIDAMLNPKRWGNCFIIDQDEVKGAKFPNLLAFANNTIENINAHLLHPIEKYHLKNTRTAQGDTEMQKALTFYAINQKKSAFANEASKELP-LESRVFYHLQAIEGLLNQLNIPFKRDFELNPNSVHALINDKSLWAKISSLPKMPLFNLRPKLNHFPLPSNTKIPQIPIESNAYIVGLVKNKQEVFLKYGNKLMTRLSPFYIEFDHSLEEVKMQIDNKDQMVKIGSVVEVKESFYIHAMDNIRANVIGFSVSNESKPNETGYTIKFKDFQKRFSLDKQERIYRIEFYKNNAFSGMILVKFV |
| 3CDX Chain:A ((41-247)) | ----------------------VEIPITVVKNG-SGPTVLLTGGVHGDEYEGQIAISDLARRLRPEEVQGRVIMLPAVNMPAIQSDTRLSPVDGRDINRCFPGDPRGTFSQMLAHFLDSVILP-MADISVDMHTAGHSYDSTPSTNMHYLA---------D-P--------ALRARTLAAAEAFGAPHNV------VF------G-----STFTSCVERRGIVSLGTELGGWGRVNIEGVRIGKRGILNVLKHMGVIEGTPETAQRGGAAGTRHMMVREADAYVMAPRTGLFEPTHYVGEEVRTGETAGWIHFVEDVDTAPLELLYRRDGIVWFGAGPGRVTRGDAVAVVMEDYND----------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CDX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64651 for 1661 contacts (-38.9/contact) +
2D Compatibility (PS) -20049 + (NN) 486 + (LL) 10136
1D Compatibility (HY) -1200 + (ID) 1950
Total energy: -77228.0 ( -46.49 by residue)
QMean score : 0.320
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