Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALNLEKKQEIIKAFATKANDTGSCEVQVALLNERIKLLTEHLKTNPKDHSSRLGLLKLVAQRRNLLKYIKRTDHVRYVVLIEKLGIKDR
1JGP Chain:R ((2-88))
-PITKEEKQKVIQEFARFPGDTGSTEVQVALLTLRINRLSEHLKVHKKDHHSHRGLLMMVGQRRRLLRYLQREDPERYRALIEKLGIRG-
General information:
TITO was launched using:
RESULT:
Template:
1JGP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 536419 for 3321 contacts (161.5/contact) +
2D Compatibility (PS) -8766 + (NN) -4761 + (LL) 272
1D Compatibility (HY) -1200 + (ID) 650
Total energy: 521314.0 ( 156.98 by residue)
QMean score : ?
(partial model without unconserved sides chains):
PDB file :
Tito_1JGP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JGP-query.scw
PDB file :
Tito_Scwrl_1JGP.pdb
: