Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKILPALLMGFVGLNASDRLLEIMRLYQKQGLEVVGQKLDSYLADKSFWAEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEIENNMLKKINSSKALVGSKKGDKTLEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDRNELNTKGCIAIENPILSSYDKVLKGEKAFLITYEDKFSPSTKEELSMILSSLFQWKEAWARGDFERYMRFYNPN-----------FT--RYDGM---SFNAFKEYKKRVFAKNEKKNIAFSSINVIPYPNSQNKRLFYVVFDQDYKAYQQNK-LSYSSNSQKELYVEIENNQASIIMEK |
| 3CNX Chain:A ((8-151)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DTDVEQVGLANTAFYEAMERGDFETLSSLWLTPADLGVPADAGVVSCVHPGWPVLSGRGEVLRSYALIMANTEYIQFFLTDVHVSVTG-----DTALVTCTENILSGG---GPLVGQLVVATNVFRRTPDGWKLWSHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CNX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41061 for 734 contacts (-55.9/contact) +
2D Compatibility (PS) -12572 + (NN) -6611 + (LL) 13132
1D Compatibility (HY) -2400 + (ID) 550
Total energy: -50062.0 ( -68.20 by residue)
QMean score : 0.389
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