Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQEIEIFCDGSSLGNPGPGGYAAILRYKDKEKTISGGENFTTNNRMELRALNEALKILKRPCHITLYSDSQYVCQAINVWLVNWQKKNF-----AKVKNVDLWKEFVKVSKGHSIVAVWIKGHNGHAENERCNSLAKLEAQKRVKTTT
1LAW Chain:A ((2-141))
LKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMAAIVALEALKEHCEVILSTDSQYIRQGITQWIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKGHAGHPENERCDELARAAAMNPTLEDT
General information:
TITO was launched using:
RESULT:
Template:
1LAW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53397 for 1076 contacts (-49.6/contact) +
2D Compatibility (PS) -14523 + (NN) -7511 + (LL) 0
1D Compatibility (HY) -8400 + (ID) 3650
Total energy: -87481.0 ( -81.30 by residue)
QMean score : 0.619
(partial model without unconserved sides chains):
PDB file :
Tito_1LAW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1LAW-query.scw
PDB file :
Tito_Scwrl_1LAW.pdb
: