Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKALKILSVGALLFVALNAKDFSKTSDEDLAKMAGVVAPQDIVDYTKEL---KKRMEKMPEDKRKAFHKQLHEYATKNT--------------DKMTVADFEARQKAIKEALKKGNMEDMDDDFGLRSCKHGKKHKHDKHGKKHGKKHDKDHDDKDHDHHDEDHSDKH |
4DJ9 Chain:A ((155-231)) | ----------------------------------------EDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTT-----QGIEEALKNRNFTVEKMSAEINEIIRVLQLTSW------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DJ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8931 for 242 contacts (36.9/contact) +
2D Compatibility (PS) -6077 + (NN) -4383 + (LL) 4600
1D Compatibility (HY) -4400 + (ID) 1000
Total energy: -2329.0 ( -9.62 by residue)
QMean score : 0.227
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