Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQYANAYQAYQHNRVSVESPAKLIEMLYEGILRFSSQAKRCIENEDIEKKIYYINRVTDIFTELLNILDYEKGGKVAVYLTGLYTHQIKVLTQANVENDASKIDLVLNVARGLLEAWREIHSDELA
1JDH Chain:A ((257-311))
-------------------------------------------------------------TTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQES----------
General information:
TITO was launched using:
RESULT:
Template:
1JDH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13702 for 314 contacts (-43.6/contact) +
2D Compatibility (PS) -5722 + (NN) -928 + (LL) 6428
1D Compatibility (HY) -2400 + (ID) 900
Total energy: -17224.0 ( -54.85 by residue)
QMean score : 0.366
(partial model without unconserved sides chains):
PDB file :
Tito_1JDH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JDH-query.scw
PDB file :
Tito_Scwrl_1JDH.pdb
: