Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIFLSCKSLLIQRSLEFYLSDCLSPVEVCDLVLSDDEKLETNKPLCFIEERLRKPFTKQSVKEDIKNFYRALKISEKPCEEIQFSKEQKIKQLLEEYTHKLCQIISQ
1R8S Chain:E ((85-123))
-------------------------------------------------------EFTDLNLVQALRQFLWSFRLPGK---------AQKIDRMMEAFAQRYCLCNPG
General information:
TITO was launched using:
RESULT:
Template:
1R8S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7781 for 186 contacts (-41.8/contact) +
2D Compatibility (PS) -4190 + (NN) -2938 + (LL) 5244
1D Compatibility (HY) -5200 + (ID) 450
Total energy: -15315.0 ( -82.34 by residue)
QMean score : 0.808
(partial model without unconserved sides chains):
PDB file :
Tito_1R8S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R8S-query.scw
PDB file :
Tito_Scwrl_1R8S.pdb
: