Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEQRKESLQNNPNLSKKDIKIVEKILSKNDIKAAEMKERYLKEGLYVLNFMSSPGSGKTTMLENLADF-K-DFKFCVVEGDLQTNRDADRLRKKGVSAHQITTGEACHLEASMIEGAFDLLKDEGALEKSDFLIIENVGNLVCPSSYNLGAAMNIVLLSVPEGDDKVLKYPTMFMCADAVIISKADMIEVFNFRVSQVKEDMQKLKPEAPIFLMSSKDPKSLEDFKNFLLEKKRENYQSTHSF
2WSM Chain:A ((11-213))
--------------------------LAENKRLAEKNREALRESGTVAVNIMGAIGSGKTLLIERTIERIGNEVKIGAMLGDVVSKADYERVRRFGIKAEAISTGKECHLDAHMIYHRLK------KFSDCDLLLIENVGNLICPVDFDLGENYRVVMVSVTEGDDVVEKHPEIFRVADLIVINKVALAEAVGADVEKMKADAKLINPRAKIIEMDLKTGKGFEEWIDFLRGILN---------
General information:
TITO was launched using:
RESULT:
Template:
2WSM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117346 for 1693 contacts (-69.3/contact) +
2D Compatibility (PS) -22057 + (NN) -9270 + (LL) 2476
1D Compatibility (HY) -15200 + (ID) 3550
Total energy: -164947.0 ( -97.43 by residue)
QMean score : 0.569
(partial model without unconserved sides chains):
PDB file :
Tito_2WSM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WSM-query.scw
PDB file :
Tito_Scwrl_2WSM.pdb
: