Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MDSKKPHYRVS--------LSEQALNHEKLMRAIVKNL------------ADTPMVL------------------------KGETALYLGYG--LNRFSEDLDFDCHKKINLLGRVKSAIPNGIILND-------IHIKKDTD----SVGRYMVR-----YATKDNKEEQTLKLEISYRDAPKESEVNVIEGMRIAKIERI-IDNKLCACFDG---EHTRTKARDLFDL-----HFLAKHY----EEHFNLDLASRLKDFSKDPDKLVSDYL-VDVKLDALLNQIMDLEETALELGVMAQLIHKKLEKQSHSLNALQEQ------------------QGYSNNDNS--LDNSNENTYTPKRRR--------------------------- |
| 4Q9T Chain:A ((12-446)) | TKILTETEKYSVTKLSTDLSFLPFEGLVDTALQKALVNDLDHIYIWNYNSIQKDTPICKISLHSSPPICLFTSSINGICIINKKNSQFLYFEDISTINNLAHVLDLKLKDNEN-ITSTINCEPSGIIIATSLGRVLFITIKDSTGKPKLELKQQLIKPQNSFFFRNLDSSKEIISLKKGPIVGKGERLLYITTRGGSLQIWQLSINSKSFKRLEINIYEHVLDSLQDLYPFAHGTLAFLDSHPIYSDTSSAHLTLASIS-------NGNEIYYLMITVILDEKTNSFQIFSIYKLNTYFTKSTVDLNHKPQLFIPNALDSIVSPTLSVYVLFNNAVVMTQISSKLDSSFPLRRKWEDIIRFNKDVEIIGSGYSTDSIYVICKDMGVLKIASH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q9T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 17036 for 1521 contacts (11.2/contact) +
2D Compatibility (PS) -25916 + (NN) 12187 + (LL) 116
1D Compatibility (HY) -12000 + (ID) 2950
Total energy: -11527.0 ( -7.58 by residue)
QMean score : 0.234
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