Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVIVLVVDSFKD-TSNGTSMTAFRFFEALKKRGHAMRVVAPHVDNLGSEE-EG--YY--------------NLKERYIPLVTE-----ISHKQH-I-----LFAKPDEKILRKA---FKGADMIHTYLPFLLEKTAVKIAREMRVPYIGSFHLQPEHISYNMKLGQF--SWLNTMLFSWFKSSHYRYIHHIHCPSKFIVEELEKY-N-YGGKKYAISNGFDPM-FKFEHP-----------QKSLFDTTPFKIAMVGRYSN-EKNQSVLIKAVALSRY---KQDIVLLLKGKGPDEKKIKLLAQKL---GVKTE-F-GFVNSHELLEILKTCTLYAHTANVESEAIACLEAISVGIVPVIANSPLSATRQFALDE-RSLFEPNNAKDLSAKIDWWLEN-KLERERMQNEYAKSALNYTLENSVIQIEKVYEEAIKDFKNNPNLFKTLS |
| 3FRO Chain:A ((3-434)) | MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRIGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHT-VFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPE--LEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGA-IPIASA-VGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSIDRAFDFIL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FRO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163036 for 3078 contacts (-53.0/contact) +
2D Compatibility (PS) -40754 + (NN) -14740 + (LL) 216
1D Compatibility (HY) -15200 + (ID) 3350
Total energy: -236864.0 ( -76.95 by residue)
QMean score : 0.438
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