Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKFAYSEPCLDEEDKKAVLEVLNSKQLTQ-GKYSLLFEEALCEFLGVKHALAFNSATSALLTLYRNFSDFNADRNEIITTPISFVATANMLLESGYTPVFAEVKNDGNID----ELALEKLITKKTKAIVSVDYAGKSVEIESIQRLCKKYSLSFLSDSSHALGSEYQNKKVGGFALASVFSFHAIKPITTAEGGAVVTNNSELYEKMKLFRSHGMLKKDFFEGEVKSVGYNFRLNEIQSALGLSQLKKAPLLRQKREEVALIYDEIFKDNPYFTPLHPLLKHQSSNHLYPILMH---QKFFTCKKLILES-----LH-KLGILV------QVHYKPIYQYQLYQQLFNTAPL---KSAEDFYSAEISLPCHANLDLESVQNIAHGVLKTFEGFNRMGFI |
4ZTC Chain:A ((2-385)) | --RFFLSPPHMGGNELKYIEEVFKSNYIAPLGEFVNRFEQSVKDYSKSENALALNSATAALHLALR-VAGVKQD-DIVLASSFTFIASVAPICYLKAKPVFIDCDETYNIDVDLLKLAI-KECEKKPKALILTHLYGNAAKMDEIVEICKENDIVLIEDAAEALGSFYKNKALGTFGEFGVYSYNGNAIITTSGGGMLIGKNKEKIEKARFYSTQA--RENCLHYEHLDYGYNYRLSNVLGAIGVAQMEVLEQRVLKKREIYEWYKEFLGE--YFSFLDELENSRSNRWLSTALINFDKNELNSCQKDINISQKNITLHPKISKLIEDLKNKQIETRPLWKTMHAQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKSIK-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZTC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -183469 for 3297 contacts (-55.6/contact) +
2D Compatibility (PS) -38932 + (NN) -15948 + (LL) 912
1D Compatibility (HY) -24400 + (ID) 5150
Total energy: -266987.0 ( -80.98 by residue)
QMean score : 0.484
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