Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGILTFMDFCSGIGGGRLGLERCHLKCVGHAEINHEAIRTYELFFKDTHNFGDLMRINPNDLPNFDVLVSGFPCQAFSINGKRKGLEDERGTIIYGLIRILKVKQPKCFLLENVKGLIHHKQQETFKTIIKALQEAGYTTHYQILNSADFQLAQKRERLYIVGFRKDLK-RPFNFPLGLANDYCFKDFLDADNECYLDVSNATFQRYLRNPYNHNRVFLEDILTLENAVLDTRQSDLRLYF--------------NVFPTLRTSRHGLF-----YTQKGKIKRLNAVESLLLQGFPRDLIAKIKNNPNFKESHLLSQAGNAMSVNVIAAIAKQMLKAFNNE |
| 3EEO Chain:A ((12-323)) | ---LRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEKPE-GDITQVNEKTIPDHDILCAGFPCQAFSISGKQKGFEDSRGTLFFDIARIVREKKPKVVFMENVKNFASHDNGNTLEVVKNTMNELDYSFHAKVLNALDYGIPQKRERIYMICFRNDLNIQNFQFPKPFELNTFVKDLLLPDSEV-----------------EHLVIDRKDLVMTNQEIEQTTPKTVRLGIVGKGGQGERIYSTRGIAITLSAYGGGIFAKTGGYLVNGKTRKLHPRECARVMGYPDSY----KVHPSTSQAY--KQFGNSVVINVLQYIAYNIGSSLNFK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EEO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156179 for 2385 contacts (-65.5/contact) +
2D Compatibility (PS) -31331 + (NN) -13063 + (LL) 2404
1D Compatibility (HY) -23600 + (ID) 5150
Total energy: -226919.0 ( -95.14 by residue)
QMean score : 0.478
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