Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNISVNPYLMAVVFVVFVLLLWAMNVWVYRPLLAFMDNRQAEIKDSLAKIKTDNTQSVEIGHQIETLLKEAAEKRREMLAEAIQKATESYDAVIKQKENELNQEFEAFAKQLQNEKQILKEQLQAQMTVFEDELNKRVAMGLGS |
3N2K Chain:E ((60-123)) | -------------------------------------------------------------YQEAELLKHLAEKR-EHEREVIQKAIEENNNFIKMAKEKLAQKMESNKENREAHLAAMLERLQEKDKHAEEVRKNKELK---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3N2K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 11932 for 264 contacts (45.2/contact) +
2D Compatibility (PS) -6613 + (NN) -1621 + (LL) 6684
1D Compatibility (HY) -800 + (ID) 1150
Total energy: 8432.0 ( 31.94 by residue)
QMean score : 0.347
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