Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQENQTIPFKCPKCQEPINVSEALYKQIESENQSRFLAQQKAFEKEVNEKRAQYQSYFKNLEQKEEALKERAKEQQAQFDEAVKQASALALQDERAKIIEEARKNAFLEQQKGLELLQKELDEKSKQVQELHQ---------KEAEIERLKRENNEAESRLKAENEKK------------------LNEKLELEREKIEKALHEKNELKFKQQEEQLE--------MLRNELKNAQRKAELSSQQFQGEVQELAIEEFLRQKFPLDSVEEIKKGQRGGDCIQVVHTREFQNCGKIYYESKRTKEFQKAWVEKLKSDMREIGADVGVIVSEALPKEMERMGLFEGVWVCSFEEFKGLSAVLREGVIQVSLAKKSQENKGDKVNLLYHYLTSSEFSMQVNAIIEGFEQLRADLESEKRAMARIWKSREKQIEKVFESTINMYGSIKGIAGNAIGQVKALELGYDEGDLEN |
1F5N Chain:A ((440-582)) | ------------------------------------------------------------------------------------------LQDLKKKYYEEPRKGIQAE-----EILQTYLKSKESMTDAILQTDQTLTEKEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQDLQTKM------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1F5N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 26458 for 524 contacts (50.5/contact) +
2D Compatibility (PS) -12876 + (NN) -16709 + (LL) 26420
1D Compatibility (HY) -5600 + (ID) 2000
Total energy: 15693.0 ( 29.95 by residue)
QMean score : 0.627
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