Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFSVLTLFPQLILPYFEDSILKRALEKNLFELEVLNLRDFSANKYQKADHTLIGGGAGQILDPEMIENALHSVKNPKHTIFL-SAVGKPFKQIDAMRLAQKKHVVLVCGRYEGFDERSIELGADEV----FCIGDFILTGGELGALCLIDSIARHIQGVLGNAQSLENESFEN-NYLETPNFANAVFKSKEINKIPAPLEYSKGNHAKIKQLKLDLSKLRTKFYRLDLFKQHKS
3QUV Chain:A ((5-231))
MKIDVVTIFPEYLQPVRQ-SLPGKAIDAGLVDVAVHDLRRWTHDVHKSVDDSPYGGGPGMVMKPTVWGDALDEICTSETLLVVPTPAGYPFTQETAWQWSTEDHLVIACGRYEGIDQRVADDAATRMRVREVSIGDYVLNGGEAAALVIIEAVLRLVPGVLGN-----------ASLLEGPSYT----RPPSWRGMDVPPVLLSGDHAKIAAWRAEQSRQRTIERRPDLL-----
General information:
TITO was launched using:
RESULT:
Template:
3QUV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -133899 for 1441 contacts (-92.9/contact) +
2D Compatibility (PS) -22579 + (NN) -8061 + (LL) 1244
1D Compatibility (HY) -16000 + (ID) 3400
Total energy: -182695.0 ( -126.78 by residue)
QMean score : 0.439
(partial model without unconserved sides chains):
PDB file :
Tito_3QUV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QUV-query.scw
PDB file :
Tito_Scwrl_3QUV.pdb
: