Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQKKRVFSGIQPTGQIHLGNYLGAIKHWVELQDE-YENLFCIVNSHAITLPIEPIF-LKSQTYELVKLLLACGISPKQSGLFIQSEVDEHPALAWLLDCQVSMGEMQRMTQFKD-KSLKNPKSVNV-GLFNYPILMASDILLYQSDLVPVGEDQKQHLELTRNVAEKFNRDFGNCFKVPEPLIAKVGARVMGLDDPKVKMSKSHKGANHAIFLLDEPDVIVKKIKKAATDSMGVIAFDETREGVFNLLNIYML--LSDESPEKIEERFRNKGYG--DFKKELAEVVIQSLKPIQERYQEISDDE--VKAVLNCGAEKARPLARATYQKAKELMGLI |
| 2G36 Chain:A ((14-339)) | ----RILSGMRPTGKLHIGHLVGALENWVKLQEEGNECFYFVADWHALTTHYDDVSKLKEYTRDLVRGFLACGIDPEKSVIFVQSGVKEHAELALLFSMIVSVSRLERVPTYKEI-------DLSTAGFLIYPVLQAADILIYKAEGVPVGEDQVYHIELTREIARRFNYLYDEVFPEPEAILSRV-PKLPGTDGR--KMSKSY---GNIINLEISEKELEQTILRMMTDPARVRRSDPGNPENCPVWKYHQAFDISEEESKWVWEGCTTASIGCVDCKKLLLKNMKRKLAPIWENFRKIDEDPHYVDDVIMEGTKKAREVAAKTMEEVRRAMNLM |
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General information:
TITO was launched using:
| RESULT:
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Template: 2G36.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -171206 for 2392 contacts (-71.6/contact) +
2D Compatibility (PS) -32888 + (NN) -11320 + (LL) 696
1D Compatibility (HY) -25600 + (ID) 5500
Total energy: -245818.0 ( -102.77 by residue)
QMean score : 0.487
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