Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKYTELKDKSIKELEELLHAKKAELFELRVKLKNMQLSNPNEIKKARRNIARINTAINAYYSSSVE
4IOC Chain:V ((1-55))
MKPSEMRNLQATDFAKEIDARKKELMELRFQAAAGQLAQPHRVRQLRREVAQLNTVKAELARKGEQ
General information:
TITO was launched using:
RESULT:
Template:
4IOC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9049 for 278 contacts (32.6/contact) +
2D Compatibility (PS) -6147 + (NN) -5758 + (LL) 0
1D Compatibility (HY) -2800 + (ID) 900
Total energy: -6556.0 ( -23.58 by residue)
QMean score : 0.755
(partial model without unconserved sides chains):
PDB file :
Tito_4IOC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IOC-query.scw
PDB file :
Tito_Scwrl_4IOC.pdb
: