Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHDFLKAFKDAFPHTISIFLGYLLMGMTFGMLLAQQGYDYKVALFMSLFIYAGAIQFVAITLLSAQASLMNVVIVSLLVNARQTCYALSMLDRFKNTKWRLPYLAHALTDETFALLNLYAPKKGVNETDFMFSISLLNHSYWIFGSLVGSLVGSHFSFDTQGMEFVMTAIFIVLFMEQYKRNTNHKNAWLGIAIAVVCLALFGTEYFLLIALVLMVLALILFRKQLEC |
| 2CPG Chain:A ((1-43)) | ---------------------------------------------------------------------------------------------------MKKRLTITLSESVLENLEKMAREMGLSKSA-MISVALENYKKGQ------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CPG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7916 for 199 contacts (-39.8/contact) +
2D Compatibility (PS) -4424 + (NN) -1797 + (LL) 18512
1D Compatibility (HY) -800 + (ID) 450
Total energy: 3125.0 ( 15.70 by residue)
QMean score : -0.052
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