Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIKTFLECALKEDLGHGDLFERVLEKDFKATAFVRAKQEGVFSGEKYALELLQMTGIECVQNIKDKERFKPKDTLMEIRGDFSMLLKIERTLLNLLQHSSGIATLTSRFVEALNSPKV--RLLDTRKTRPLLRIFEKYSVLNGGASNHRLGLDDALMLKDTHLKHVKDLKSFLTHARKNLPFTAKIEIECESFEEAKNAMSAGADIVMCDNMSVGETKEIAAYREAHYPFVLLEASGNISLESINAYAKSGVDAISVGALIHQATFIDMHMKMA
4I9A Chain:A ((44-285))
--------------------------------AVLWAKSPGILAGRPFFDAIFAQVNCQVSWFLPEGSKLVPVAKVAEVRGPAHCLLLGERVALNMLARCSGVASAAATAVETARGTGWAGHVAGTRKTTPGFRLVEKYGLLVGGATSHRYDLGGLVMVKDNHVVAAGGVKQAVQGARRAANFALKVEVECSSLQEALEAAEAGADLVLLDNFRPEELHPTAAALKAQFPTVGVEASGGVTLDNLPQFCGPHIDVISLGMLTQAAPALDFSLKLF
General information:
TITO was launched using:
RESULT:
Template:
4I9A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -128570 for 2006 contacts (-64.1/contact) +
2D Compatibility (PS) -25684 + (NN) -10334 + (LL) 2676
1D Compatibility (HY) -15600 + (ID) 3950
Total energy: -181462.0 ( -90.46 by residue)
QMean score : 0.475
(partial model without unconserved sides chains):
PDB file :
Tito_4I9A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4I9A-query.scw
PDB file :
Tito_Scwrl_4I9A.pdb
: