Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEGVLNFLTNINVIFTLLGYLIGGIPFGYALMKIFYGMDITKIGSGGIGATNVLRALQSKGVSNAKQMALLVLILDLFKGMFAVFLSKLFGLDYSLQWMVAIASILGHCYSPFLNFNGGKGVSTIMGSVVLLIPIESLIGLTVWFFVGKVLKISSLASILGVGTATVLIFFVPYMHIPDSVNILKEVGTQTPMVLIFIFTLIKHAGNIFNLLTGKEKKVL
2UVP Chain:A ((7-186))
MK-------------NFYDWIKEFIRDQGEFIAQQSGWLELE--------RSSYAKLIAQTISHVLNGGSLLVSADSSRHWFLNYILSNLNPK----------DLKERPLLSVIDFNA-SSFYPKNDANLSLATIEMTYQNPMFWHVGKIEN-EGLKTILLSKIPSFLWLFEELK---EDCLLLKEHDSLLDYKLLQLFKLFENA--LFSVLYNKVTL--
General information:
TITO was launched using:
RESULT:
Template:
2UVP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -152728 for 1223 contacts (-124.9/contact) +
2D Compatibility (PS) -18444 + (NN) 771 + (LL) 2548
1D Compatibility (HY) -9600 + (ID) 1550
Total energy: -179003.0 ( -146.36 by residue)
QMean score : 0.201
(partial model without unconserved sides chains):
PDB file :
Tito_2UVP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2UVP-query.scw
PDB file :
Tito_Scwrl_2UVP.pdb
: