Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVICKHYTPLDIASQAIRTCWQSFEYSDDGGCKDRDLIHRVGNIFRHSSTLEHLYYNFEIKGLSRGALQELSRHRIASLSVKSSRYTLRELKEVESFLPLNETNLERAKEFLVFVDDEKVNE-MSVLALENLRVLLS--EHNIKNDLAKYAMPESYKTHLAYSINARSLQNLLTLRSSNKALKEMQDLAKALFDALPYEHQYLFEDCLKH
4GTE Chain:A ((35-220))
----------------AVRAARVSFDM----EERDRHLIEYLMK-HGHETPFEHIVFTFHVKAPIFVARQWF-RHRIASYNELSGRYSKLSY---EFYIP----SPERLEGYKTTIPPERVTEKISEIVDKAYRTYLELIESGVPRRVARIVLPLNLYTRFFWTVNARSLMNFLNLRADSHAQWEIQQYALAIARIFKEKCPWTFEAFLKY
General information:
TITO was launched using:
RESULT:
Template:
4GTE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45942 for 1180 contacts (-38.9/contact) +
2D Compatibility (PS) -18573 + (NN) -3436 + (LL) 1852
1D Compatibility (HY) -11200 + (ID) 2800
Total energy: -80099.0 ( -67.88 by residue)
QMean score : 0.326
(partial model without unconserved sides chains):
PDB file :
Tito_4GTE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GTE-query.scw
PDB file :
Tito_Scwrl_4GTE.pdb
: