Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKMANTKTEQDFEKVLKRRDLIAANFRWLFASQICWNYERMMSTGYLYSILPTLRKLYKTDDDLKDMMNMHNQFFNTNPMVGGLILGMDMAIEEREKKASKEVVTGLKTGLMGPFAGVGDTIFGVILPTIFGSIAAYMGLQGNVTGVVIWVLVNILVVGARFTLLPLGYKQGAKLVTEFADRL-NALTDAAILLGVTVVGALIPTVIKATVPFVYKSGKVELKMQDMLDQIMPSLVPVLLVALIYALLGHKKMTSTKAILLVMVIAIILFNLKILG |
4JAT Chain:A ((105-179)) | ------------------------------------------------------------------------------------------------------------------------TVTGVAVPSLDARIAGRLGLRPDVR---------------RMPLFGLGSVAGAAGVARLRDYLRGAPDDVAVLVSVELCSLTYPAV-KPTV----------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JAT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37852 for 370 contacts (-102.3/contact) +
2D Compatibility (PS) -7660 + (NN) 661 + (LL) 17324
1D Compatibility (HY) -6400 + (ID) 1400
Total energy: -35327.0 ( -95.48 by residue)
QMean score : 0.224
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