Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKPSMKRQIAQTGIIHRPLPIETEHALETLAKKKQVLSSRTLFSSKQHVSLEFTHQGAGDFTISGQDEIKLSSPVVMPHWPAGAPDDGDYTNFGNVTISASIGNEDWSGFNRVRIQVFPDFPGVTNPYLMISFKNDGTVKVPDIYGREGVHGVNLINHEWNDVIFEIEGLPRDRMTEMSFSYYLNGPERLTAGTMELFINEIKLEQISEPEISKGWLPQNNTLIYSHNGYSKDMPKVAFCANKHAATTFTIHDKETDKVVFTGKSYQNATETGNFVILDFSDLQTVGEYYLKFADMQTEIFQIGTSEVIWESSIWKSLNFIFCERCGCPVF----GKHTTCHADIIAEHDGKQLSFNGGWHDAGDVSQQLIQTAEVTMALYEMAASLPEKE--ETLRMRLLEEGEWGLDFILKTRFGDGFRATS-----AGMTRWTDGLVGGMDDAIARV-----H--NQAYENFYCAGIEAYIGSQIAD-NATMQNHLLRIAEEDLLFAIKELEKHGTSQKPIFWEHTYQTSESLYYATASWAASMVYQLTNKEIYAEKAAEWLDLMLEAQEKAGIRDSETSELYKGFFYRDKSHKVIQHFNHQAREHLYLLALEAALETQPSHAEKQTWLQAVEMYGDYLKKVTRFTKPYPLIPAGLYKKDEYLDEASFHLQHLLIDERAIEEYQLQFEQGIKINDEVALRKFPIWFS-FRGNNAILLSAGKAASIAGKILK----DKALLDIAEGQLQWVIGMNPFGQSMMHGEGYRYAQQYSV--LNGE------IT---GEIPVGMETFRNE--DEPYWPEFNNATYKEVWVGNAGKWMSIVADLNKITGKS |
| 1TF4 Chain:A ((4-446)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDG---ADVGLDLTGGWYDAGDHVKFGFPMAFTATMLAWGAIESPEGYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGDGDADHKWWGPA----EVMPMERPSFKVDPSCPGSDVAAETAAAMAASSIVFADDDPAYAATLVQHAKQLYTFADTYRGVY--SDCV-PAGAFYNS-WSGYQDELVWGAYWLYKATGDDSYLAKAEYEYDFLSTEQQTDL-R-----SYRWTIAWDDKSYGT--------------YVLLAKE--T----GKQKYIDDANRWLDYWTVG---VNGQRVPYS-------------------------PGGM--------------------AVLDTW-GALRYAANTAFVALVYAKVIDDPVRKQRYHDFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTAHGSWTDSIASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAMLVEEYGG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TF4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92624 for 3757 contacts (-24.7/contact) +
2D Compatibility (PS) -43155 + (NN) -21588 + (LL) 23728
1D Compatibility (HY) 4000 + (ID) 3850
Total energy: -133489.0 ( -35.53 by residue)
QMean score : 0.359
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