Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDFYEISSKTVASLTRNERILFDYVVKNMNLIKNQSIREVSAECFVSTTTFLRFVRKLGFTGYSEFTTVLKFTLLGHTELKPSPFVVEQSDYREEYLKNIIESVRVLEPSKIKKITKKLVNKPRIYFFAKGLSKHAAKYIKYLYTMSGFLVEFPEDYQYR-------------------QAVLPHIGKDDLVFILTYGGHDIELIQTAQKLKSRNETPMLISITGADNN-----------IIQNMSDINLYIFTDEIE-------------MNNLDITSRISTIAIMELILYQFMEDETSSF |
| 3CVJ Chain:A ((12-215)) | -------------------------------------------------------------------------------------------FFNRILSEVQETQEQAIIKGAHLVSEAVMNGGRFYVFGSGHSHMIAEEIYNRAGGLALVTAILPPELMLHERPNKSTYLERIEGLSKSYLKLHQVTNKDVIMIISNSGRNTVPVEMAIESRNIGA-K-VIAMTSMKHSQKVTSRHKSGKKLYEYADVVLDNGAPVGDAGFQIANSEIYSGATSDSIGCFLAQALIVETLHLLVQQG----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CVJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83429 for 1381 contacts (-60.4/contact) +
2D Compatibility (PS) -17381 + (NN) -6398 + (LL) 7664
1D Compatibility (HY) -3600 + (ID) 1100
Total energy: -104244.0 ( -75.48 by residue)
QMean score : 0.413
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