Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGNVKIDAAKVAEAKKSAAIVEKSLESTHKKCKSVISYVEGASWSGKSRDAFLTFMELIEKYHADVKKNYKKQKKALTALEDYVEDFENTSYSKDVKRL
2G38 Chain:B ((24-83))
----------MLAAARAWRSLDVEMTAVQRSFNRTLLSL-MDAWAGPVVMQLMEAAKPFVRWLTDLCVQLS----------------------------
General information:
TITO was launched using:
RESULT:
Template:
2G38.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1226 for 294 contacts (4.2/contact) +
2D Compatibility (PS) -6522 + (NN) -4027 + (LL) 2904
1D Compatibility (HY) -2800 + (ID) 200
Total energy: -9419.0 ( -32.04 by residue)
QMean score : 0.358
(partial model without unconserved sides chains):
PDB file :
Tito_2G38.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2G38-query.scw
PDB file :
Tito_Scwrl_2G38.pdb
: