Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQQTMGGAGAASTIDINPDEMT-----HIAKELLAIANEFEGVIKPAVNQLKANKYLTKG---KAKKAMDKVPKANERVMELQDQYNMASSVVFDILQTMVDADRDIAEKIIAALEV
3WHJ Chain:A ((3-119))
MEEEELSKLLANVKIDPSLTSRISQIDSFKLSELMVLKTDIETQLEAYFSVLEQQGIGMDSAYPRSDVDVLQVTMIRKNVNMLKNDLNHLLQRSHVLLNQHFDNMNVKSNQ-------
General information:
TITO was launched using:
RESULT:
Template:
3WHJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15724 for 554 contacts (-28.4/contact) +
2D Compatibility (PS) -11070 + (NN) -3128 + (LL) 1168
1D Compatibility (HY) -2800 + (ID) 700
Total energy: -32254.0 ( -58.22 by residue)
QMean score : 0.423
(partial model without unconserved sides chains):
PDB file :
Tito_3WHJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WHJ-query.scw
PDB file :
Tito_Scwrl_3WHJ.pdb
: