Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKEVNYREDDWREAKSALAPFAAANWVGGLFNNLEKVSKNMEEAEEDVQELDSDHAISFQHTNYRGKYSAIEDDLMVLYKFSCHAGEKMETLVDQPFYEKLDAFVDGMQDLSISTYSTTNRIGAKSKQTYTTTSGGSQVIESIKEGATIEDLMNGDNFYANQMQLQYRDWQRANPDQDVSKKDFQMGMLHSRAFEYKSIKDEQQEKEFWVNIVATVVIVGVSIFCPPAGLALAVGYGSLEAGSAISGKDWVSGRELSTEERALRGGLALLDIVPGVKALSTGAKAASAGSKLVRVGDNVLAGSKNVGKGTIDNGIQAGKQAMDLRLANAKKVSEAVQKKLTKDLDDIGTMAKTIQNKTKETFTLPPREQLAFARGGSIPEQSATGAAAIAAKKKLKDIMQNMDNLNVKGGGKDDIIEQNKSLKFTSLEESEKWGIDGFSVWRNSLSSREIQAIRDYTDIWHYGNMNGYL--RGSVEKLAPDNAERIKNLSSALEKAELPDNIILYRG----------TSSEILDNFLDLKNLN--YQNLVGKTIEEKGFMSTT--TISNQTFSGN-VTMKINAPKGSKGAYLAHFSETPEEAEVLFNIGQKMLIKEVTEL-NGKI-EIIVDLL |
2WN8 Chain:A ((230-415)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WGKANYNDWSNKLTPNELADVNDYMR-GGYTAINNYLISNGPVNNPNPELDSKITNIENALKREPIPTNLTVYRRSGPQEFGLTLTSPEY--DFNKLENIDAFKSKWEGQALSYPNFISTSIGSVNMSAFAKRKIVLRITIPKGSPGAYLSAIP---GEYEVLLNHGSKFKINKIDSYKDGTITKLIVD-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WN8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52920 for 1104 contacts (-47.9/contact) +
2D Compatibility (PS) -17604 + (NN) -613 + (LL) 27692
1D Compatibility (HY) -14400 + (ID) 2800
Total energy: -60645.0 ( -54.93 by residue)
QMean score : 0.440
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