Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRGQEEIDKEQYQVLFIKERLIPCVLGAVIGDCLGVPVEFKDREYLK--QNPIVEMIGYGT---YNQPKGTWSDDSSLTFALMESLI-SGYDINRIVNNMVSFMDDGFWTPYGEVFDIGSVTRESLNRYKNGVSVFECGGKDNFDNGNGAIMRIMPLVFY-LGKDFSFGKKN-KITEEVTRITHAHPRSILGSYVYIELLQNLFANMDKKLAYEEMQNYIRKNYSDYPFKDELQYYNNILEGNLYELKESNIKSSGYVVDTLEASIWAFLTTNSYKEAVLKAVNLGGDTDTIAFITGSLAGIYYKMEQIPVNWIDQIAKKEDILNLCNRFIESLIKQ |
| 1T5J Chain:A ((3-303)) | -------------LVKMRDKILGSVFGAVIGDALGMPTENLTKEEIKKLYGFVDSYVEPKNYLAGKLNKGEWTDDTEQAICLIKSLTKEGIDIKKFANCLIAWKNKN-------PPDIGLTSLMAIDKLENND------YSGVDSSSCGAAMRIYPLGIVFHNN---L-KKLKEEVIKASKITHNNKTAIAGALAIAFFVSSALKDRKDFSLLDECYNYIKDID--EEFAKKLLEIKNFN--NL-DYIYDYFGTGVKTDEVVPSAIATYLLTDNFKEGMLKCINAGGDTDSLASMYGAMAGAYYGFKNIPKEWIDGLKNKEVIFELAERLYHLATE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T5J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179710 for 2767 contacts (-64.9/contact) +
2D Compatibility (PS) -30562 + (NN) -3832 + (LL) 1496
1D Compatibility (HY) -13200 + (ID) 4050
Total energy: -229858.0 ( -83.07 by residue)
QMean score : 0.473
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