Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKKNLEQIYAIEFTMGLRYRPMQIRHNIKLIFLLLLFVTWLQGDFMNRLPGNLDITKVDMPLVLLALLCYIILYPQKMTIRFQNLQYLLYICCFQFLVFMVIRYFYSNLIYGIQNMVSLTAQTLVASYVFLLVLWILALIFFYFHFRKKLRNGDYRKDSELQKKRSNLGLKLSKGSYILIGAFFVFILSSQIVGGIMVDIMIISIEIVGIALCSMGIVIFPEQLFTAYCKFKFKEFHIEE |
| 1L4A Chain:E ((49-76)) | -----------------------------------------------------------------------------------------------------------------------------------------------ERRKEKHRKMEEEREEMRQTIRDKYGLK--------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1L4A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7716 for 113 contacts (68.3/contact) +
2D Compatibility (PS) -2915 + (NN) -41 + (LL) 22404
1D Compatibility (HY) 1200 + (ID) 350
Total energy: 28014.0 ( 247.91 by residue)
QMean score : 0.419
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