Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LAEVDKSTIGEVEGVTFQSYFLIKNMLHTRVVGDLEKRLPVTLEKMVEYVESNRKEIITPIFIVLNYVGNVPYVDVYVGIDPYDE
4G1A Chain:A ((2-27))
-------------------------------IAALEQKIA-ALEQKCAACEQKIAALE---------------------------
General information:
TITO was launched using:
RESULT:
Template:
4G1A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2247 for 96 contacts (23.4/contact) +
2D Compatibility (PS) -2587 + (NN) 700 + (LL) 4352
1D Compatibility (HY) -1600 + (ID) 250
Total energy: 2862.0 ( 29.81 by residue)
QMean score : 0.334
(partial model without unconserved sides chains):
PDB file :
Tito_4G1A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4G1A-query.scw
PDB file :
Tito_Scwrl_4G1A.pdb
: