Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceVKLPPEADYLNDETLEVYENDKKKYDQTNQLITNNSVTILLGDFCYYESAWSSRWRDNRFWIGSKVS
2GJD Chain:A ((123-150))---PNPNSPAQEPAWRSFSRNKAEYDKKVLL------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2GJD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9092 for 138 contacts (65.9/contact) +
2D Compatibility (PS) -3028 + (NN) -2024 + (LL) 2564
1D Compatibility (HY) -400 + (ID) 250
Total energy: 5954.0 ( 43.14 by residue)
QMean score : 0.427

(partial model without unconserved sides chains):
PDB file : Tito_2GJD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GJD-query.scw
PDB file : Tito_Scwrl_2GJD.pdb: