Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTFLEFHQLVKEDLLIYSWIIKNFHLTRQKLMAGGEITMNR---EQVIVMEKGLLVQVN--EEGKNDLYRVFIDQRIIFTTK-----GDITLTALEDTSYSIIRTDELIGKLEDQHLLPTFFLQIAEDFEKGLDWQR-TLISVDPAERAEMILVKIIERYEINSENKPEFPRWLRINVLARFAKCSVSTMSSVVNELVNEGDLNIKGTPWLLTRPYQASCA
3B02 Chain:A ((2-185))
----------------------------KRFARKETIYLRGEEARTLYRLEEGLVRVVELLPDGRLITLRHVLPGDYFGEEALEGKAYRYTAEAMTEAVVQGLEPRAM------DHEALHRVARNLARQMRRVQAYEAHLQTGELRARIARYLLFLADTPLSA-RDRQGIYVTVSHEEIADATASIRESVSKVLADLRREGLIATAYRRVYLLDLAALE--
General information:
TITO was launched using:
RESULT:
Template:
3B02.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107583 for 1288 contacts (-83.5/contact) +
2D Compatibility (PS) -18369 + (NN) -4950 + (LL) 3572
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: -131130.0 ( -101.81 by residue)
QMean score : 0.492
(partial model without unconserved sides chains):
PDB file :
Tito_3B02.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3B02-query.scw
PDB file :
Tito_Scwrl_3B02.pdb
: