Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSVISIILVVLIAFLAGIEGILDEFQFHQPLIACTLIGLVTGNLTACIILGGTLQMIALG---WANIGAAVAPDAALASVASAIILVLGGQGVAGIPSAIAIAIPLAVAGLFLTMIVRTLAVPIVHLMDRAAEKGNIRSVEWLHISAICMQGVRIAIPAAALLFIPADSVQSFLEAMP-AWLTDGMAIGGGMVVAVGYALVINMMATKEVWPFFVIGFVVAAISQLTLIAIGALGVALALIYLNLSKMGGGNSNGGGGGNSRDPLGDILNDY--------------- |
4Q0S Chain:A ((12-260)) | SARTSITRREYDEWVREAAALGKALRYP--------ITEKMVNDSAGIVFG-ADQYDAFKNGMWSGE----------PYEAMIIFESLNEPAVDGLPTGAAPYAEYS-GLCDKLMIVHPGKFCPPHHHGRKT------------------ESYEVVLGEMEVFYSPTPSAESGVELLNFSGMPVGSPWPEGVALPKGRESSYEKLTSYVRLRAGDPKFVMHRKHLHAFRCPPDSDVPLVVREVSTYSHEPTEAAAGNHAPIPSWLGMHDNDFVSDAANTGRLQTAIS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q0S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -232857 for 1747 contacts (-133.3/contact) +
2D Compatibility (PS) -23581 + (NN) 5149 + (LL) 3160
1D Compatibility (HY) 2800 + (ID) 1900
Total energy: -247229.0 ( -141.52 by residue)
QMean score : 0.125
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