Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKPRIYTMSFASVYPLYIQKAEKKDRTKEEVDEIIFWLTGYDQDSLQQAIDQAIDFETFFAEAPKMNPNASLITGVICGYRVEEIEDKLMQQIRYLDKLVDELAKGKKMEKILRK
3HI2 Chain:B ((28-67))
---------------------------TRSALLNADEL--GLDFDGMCNVII-GLSESDFYKSMTTYSDH----------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3HI2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2493 for 157 contacts (-15.9/contact) +
2D Compatibility (PS) -4213 + (NN) 51 + (LL) 7004
1D Compatibility (HY) -2000 + (ID) 300
Total energy: -1951.0 ( -12.43 by residue)
QMean score : 0.369
(partial model without unconserved sides chains):
PDB file :
Tito_3HI2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HI2-query.scw
PDB file :
Tito_Scwrl_3HI2.pdb
: