Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMARNKFDIDEELETAFSAAHLKRILVYVKPYQKSIYITLFVILLANVATMIGPYLTKIVIDDTIPNK------NMTQL-FWIAVIFIVSVIVTGLCMRYRIRSITLIGQDILKDMRTAIFGHLQKLPFSYFDSRPHGKILIRVVNYINMLSDLLSNGLINLISDILSVIVTLGFMLMIDPVLTLYSLALIPVLFVIVMVIKTAQRKAYQVLSNKQSNMNAYIHESIAGIKVTQSFSREEENFEIF-TEVSNEYRRSWMKA-VKIQFLLWPGVQ-NIAVMTTCLIYFVGIKGYGVDVSTGTLIAFIGYVGNFWNPVINIG---NFYNSLITATTYLERIFETMDVEPDIK----DIPNAKKMPPIVGNVDFKDVYFRY--EEGVDILKGINFHVDAGESIALVGPTGAGKTTIINLLSRFYNINSGEILVDGENVEEVTLRSLRSQMGVMLQDTFIFSGTIIENIRYGKLDA---TEEEIIAAAKVVRAHDFISGLKDGYYTEVKERGSTLSAGQRQLISFARALLADPKILILDEATSSIDTQTEILLQEGLERLLEGRTSFIIAHRLSTIKNSSRIFYIDNGRIQEAGSHEELMAQHGYYYNLYQSQFDMLQAL
4AYW Chain:A ((39-598))---------------------RKLLGLAYPERRRLAAAVGFLTMSSVISMSAPFFLGKIIDVIYTNPTVDYSDNLTRLCLGLSAVFLCGAAANAI----RVYLMQTSGQRIVNRLRTSLFSSILRQEVAFFDKTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGISMMFFVSPNLATFVLSVVPPVSIIAVIYGRYLRKLTKVTQDSLAQATQLAEERIGNVRTVRAFGKEMTEIEKYASKVDHVMQLARKEAFARAGFFGATGLSGNLIVLS--VLYKGGLLMGSAHMTVGELSSFLMYA--FWVG-ISIGGLSSFYSELMKGLGAGGRLWELLEREPKLPFNEGVILNEKSFQ---GALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTISLDGHDIRQLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKGVLLSGGQKQRIAIARALLKNPKILLLDE----LDAENEYLVQEALDRLMDGRTVLVIAHHLSTIKNANMVAVLDQGKITEYGKHEE----------------------


General information:
TITO was launched using:
RESULT:

Template: 4AYW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -334689 for 3858 contacts (-86.8/contact) +
2D Compatibility (PS) -56209 + (NN) -14408 + (LL) 4892
1D Compatibility (HY) -38000 + (ID) 8400
Total energy: -446814.0 ( -115.81 by residue)
QMean score : 0.405

(partial model without unconserved sides chains):
PDB file : Tito_4AYW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4AYW-query.scw
PDB file : Tito_Scwrl_4AYW.pdb: