Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDLFLELNGKVHSLSETFPGLSVQEVSRQSPQLSMETAEIAGTDGVIPGMTQFKPF-IFSAKCNLQALDIPDYHLAVREIYEFLFQRDSYYI------------WSDQMPGIRYEVHPKPVDFS--------RESDRVGLLTIEFDVFKGYAESRGT-----------------SLDPMTFEVDLW---QMGMNLSNRDDLFYIFKEN----------------TFRVYNAGSDRVNPL-----MRHELDIAMTANG-TPTIHNLTTGESFEYQKELRKT----DVLLLN----------NIYPLVNNRRVGKDTNHGIIT----------------LEKGWNDFEIKGVTDVTIAFNFPFIYR-------------- |
| 2B78 Chain:A ((1-385)) | MIKLMVG-SFAEKKLKRGVQLLSSRDYPNLNLD--NQVVQLYSDADIFLGTAYLSKQNKGVGWLISPKKVSLNVTYFIKLFQWSKDKRKNFAHSKLTTAYRLFNQDGDSFGGVTIDCYGDFVLFSWYNSFVYQIRDEIVAAFRQVYPNFLGAYEKIRFNVSAHLYGQEAPEQFLILENGISYNVFLNDGLMTGIFLDQRQVRNELINGSAAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIIIDPPSFEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQIEKGFGKQKHTYLDLQQLPSDFAVNVQDESSNYLKVFTIKV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2B78.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45808 for 1798 contacts (-25.5/contact) +
2D Compatibility (PS) -27877 + (NN) -6895 + (LL) 324
1D Compatibility (HY) -6400 + (ID) 1950
Total energy: -88606.0 ( -49.28 by residue)
QMean score : 0.157
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