Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------MTKIVKMSEKNEHGTLEQFYPETHAEAVKGLVSVSEEEKTIWDQKESTAGAEQKANTALNSAKDYVDTIGEGTVIFKGANLMGAGQSFKWDASKLKFG------------MTLLFSRYDAANNTPQDYYYHSVFLSKAQLVELA--------GKGILVQMPSTTY--GDRKYLYVSTTGLSGHFDNSNYAAWALRQVTIM-- |
| 4BTB Chain:A ((3-237)) | PGFFTSIGQMTDLIHTEKDLVTSLKDYIKAEEDKLEQIKKWAEKLDRLTSTATKDPGHPVNAFKLMKRLN---TEWSELENLVLKDMSDGFISNLTIQRQYFPNDEDQVGAAKALLRLQDTYNLDTDTISKGNLPGVKHKSFLTAEDCFELGKVAYT--EADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNLKYFEYIMA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BTB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16433 for 1042 contacts (-15.8/contact) +
2D Compatibility (PS) -18077 + (NN) -5791 + (LL) 184
1D Compatibility (HY) -2000 + (ID) 1450
Total energy: -43567.0 ( -41.81 by residue)
QMean score : 0.222
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