Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------MLKTIIKRVLQIIPMLF---------------IISIISFALIKLAPGDPVNSFVTPDMNPDD--VERIRQSLGLDQPIYVQYFIWLGNLLQGNLGYSIVNSQPVLQQILERIPATLGLVGTSLVLT-LLLSIP-LGLVAANYENTWIDKVLNGISY------IGISIPIFWFGMILIDVFSIQLG-WLPSLGMRTIGVDSFWDMAEHAILPVITLTFQGCAAYYRYVRSNTINQLKEEYVLFGYAKGLSKVQIMGHHVLKNSLLPVITLLGMSLPQVITGAFITESIFSWPGMGSLGINAIFQL---DYPVIMAITLF----SALLLIIGNLLADLAYMIVDPRIREMG |
| 3THI Chain:A ((1-362)) | ITLKVAIYPYVPDPARFQAAVLDQWQRQEPGVKLEFTDWDSYSADPPDDLDVFVLDSIFLSHFVDAGYLLPFGSQDIDQAEDVLPFALQGAKRNGEVYGLPQILCTNLLFYRKGDLKIGQVDNIYELYKKIGTSHSEQIPPPQNKGLLINMAGGTTKASMYLEALIDVTGQYTEYDLLPPLDPLNDKVIRGLRLLINMAGEKPSQYVPEDGDAYVRASWFAQGSGRAFIGY-SESMMRMGDYAEQVRFKPISSSAGQDIPLFYSDVVSVNSKTAHPELAKKLANVMAS-----ADTVEQALRPQADGQYPQYLLPARHQVYEALMQDYPIYSELAQIVNKPSNRVFRLGPEVRTWLKDAKQVLPEALG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3THI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -275968 for 2505 contacts (-110.2/contact) +
2D Compatibility (PS) -32136 + (NN) -1928 + (LL) 564
1D Compatibility (HY) -2400 + (ID) 2250
Total energy: -314118.0 ( -125.40 by residue)
QMean score : 0.189
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