Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MINSRFYEGFEGEAEL------SFVAGDNKLL-IWNGYFETILDNLLDCNVEREGVLKEYFNHEGWYDDSPWM------------IEDNSLTIIQLKCFDINKINQTSMKDDLEEVVKTIISFLENNRFSKIYIEYE------
1QGT Chain:A ((1-142))
-MDIDPYKEFGATVELLSFLPSDFFPSVRDLLDTASALYREALESPEHCSPHHTALRQAILCWGELMTLATWVGNNLEDPASRDLVVNYVNTNMGLKIRQLLWFHISCLTFGRETVLEYLVSFGVWIRTPPAYRPPNAPILST
General information:
TITO was launched using:
RESULT:
Template:
1QGT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12501 for 735 contacts (-17.0/contact) +
2D Compatibility (PS) -11905 + (NN) -1542 + (LL) 208
1D Compatibility (HY) -6000 + (ID) 950
Total energy: -32690.0 ( -44.48 by residue)
QMean score : 0.011
(partial model without unconserved sides chains):
PDB file :
Tito_1QGT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QGT-query.scw
PDB file :
Tito_Scwrl_1QGT.pdb
: