Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKIVGVRFKDVGKIYYFSPGELEITENQGVIVENAQGIEFGKTVIEPRYVDEEDVVLPLKKVLRIATEADYKCVAENGDSCQKAFLLCDEKIRERELEMSLVDVDYTFDRNKIIFYFTAEGR-VDFRELVKDLASVFRTRIELRQIGVRDEAKLLGGIGPCGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYEQAKREMPDVGVKVKTPEGAEARVSGINLLSRILQVSLPEEETVIEYELDELRPYNEFLKQPAKS |
2YCB Chain:A ((21-65)) | ---------------------------------------------------------------------------------------------------VQVAKVEF--EGPEVVIYTKNPEIITENGNLIRDIAKDIRKRIIIRS------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -17347 for 237 contacts (-73.2/contact) +
2D Compatibility (PS) -4701 + (NN) -1667 + (LL) 16072
1D Compatibility (HY) -3600 + (ID) 450
Total energy: -11693.0 ( -49.34 by residue)
QMean score : 0.436
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