Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVGMTRKKTLFWLCIFLLPNLLGFLIFIAIPILGSLGISFTDWDLVSTIHFTGFENYKRLFNDPEFWKSFRNTITFIIGYLPSVMILGLACALMLNQ-KIKLRPFFRAVYFLPVITSWVAVSLVWKWLFNPSYGLINYFLSLIGIAGPNWLTDPQTAMIAVIITSAWKDIGFVMVLFLGGLQNISPSYYEAANMDGASKLRQLFSITIPLLTPTTFFVTIISLINSFQVFDQVMIMTEGGPSGATMTLVQNIYNHAFRYFEMGYASAMSWILFIVIFIITIIQNKLQKRWSNY |
3D31 Chain:C ((44-283)) | -------------------LLLVLFLFIFLTLSNMIFEQITE----------DFSGLVKAAGNRSVISSIFLSLYAGFLATLLALLLGAPTGYILARFDFPGKRLVESIIDVPVVVPHTVAGIALLTVFGS-RGLIGEPLESYI----QF----RDALPGIVVAMLFVSMPYLANSAREGFKSVDPRLENAARSLGAPLWKAFFFVTLPLSARYLLIGSVMTWARAISEFGAVVILAY-YP----MVGPTLIYDRF-ISYGLSASRPIAVLLILVTLSIFLVIR--------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3D31.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -200463 for 1849 contacts (-108.4/contact) +
2D Compatibility (PS) -24163 + (NN) -426 + (LL) 3556
1D Compatibility (HY) -18000 + (ID) 1900
Total energy: -241396.0 ( -130.55 by residue)
QMean score : 0.308
|
|
|