Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSGKPVIHEFIVVEGRDDTTAINRSVI--ADTIETNGSAL------------------------SQETIEKIRHAQELRGVIIFTDPDFPGEKIRKQIDSAVPGCKHAFINRQDALPKAGRGLGVEHASSANIREALENFHTSGAPTEKQFISKDILVHLGLLGGVGAKERREKIGNILKIGYTNGKQLQTRLESFAISEEQLVAACQKIMQEEENE |
2GAI Chain:A ((7-143)) | --------KYIVVESPAKAKTIKSILGNEYEVFASMGHIIDLPKSKFGVDLEKDFEPEFAVIKGKEKVVEKLKDLAKKGELLIASDMDREGEAIAWHIARVTNTL----GRK--------NRIVFSEITPRVIREAVKNPREI-------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GAI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38659 for 718 contacts (-53.8/contact) +
2D Compatibility (PS) -10760 + (NN) -3072 + (LL) 6560
1D Compatibility (HY) -5200 + (ID) 1000
Total energy: -52131.0 ( -72.61 by residue)
QMean score : 0.545
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